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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs76085259 chr22:24050288 G/A IGLL3 chr22:25713888-25716191:+ 0.6 8.96 7.23E-18 Box Plot
THCA rs7608774 chr2:101085322 G/T LOC285359 chr3:101431278-101432259:+ 0.32 6.26 8.78E-10 Box Plot
THCA rs7608954 chr2:132276359 T/C CCDC74B chr2:130896860-130902707:- 0.4 7.14 3.39E-12 Box Plot
THCA rs7609289 chr2:132216460 T/C CCDC74B chr2:130896860-130902707:- 0.39 6.98 9.81E-12 Box Plot
THCA rs7609536 chr2:101092526 C/A LOC285359 chr3:101431278-101432259:+ 0.31 6.24 9.89E-10 Box Plot
THCA rs7612642 chr3:125796210 A/G ROPN1 chr3:123687368-123711025:- -0.34 -6.21 1.16E-9 Box Plot
THCA rs76127312 chr5:18451403 T/G GNB4 chr3:179113877-179169378:- 0.49 6.01 3.75E-9 Box Plot
THCA rs76139333 chr2:132200096 A/G CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs76160864 chr11:49188598 CAAA/C FOLH1B chr11:89372395-89431886:+ -0.38 -6.57 1.34E-10 Box Plot
THCA rs7622088 chr3:148865856 C/A LOC93622 chr4:6675818-6677774:+ -0.3 -6.1 2.25E-9 Box Plot
THCA rs762263 chr22:24021462 G/A IGLL3 chr22:25713888-25716191:+ 0.71 10.13 5.49E-22 Box Plot
THCA rs7624939 chr3:125800139 A/G ROPN1 chr3:123687368-123711025:- -0.34 -6.2 1.25E-9 Box Plot
THCA rs7626527 chr3:153042519 C/T HNRPLL chr2:38790328-38830178:- 0.37 6.02 3.44E-9 Box Plot
THCA rs7630213 chr3:125681939 A/G ROPN1 chr3:123687368-123711025:- -0.4 -7.31 1.13E-12 Box Plot
THCA rs76311455 chr8:11790526 C/G SGK223 chr8:8175258-8244008:- -0.44 -8.16 2.91E-15 Box Plot